IL_9PS0_078

3D structure

PDB id

9PS0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/P-P/E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

UAAAACU*ACACAAA

Length

14 nucleotides

Bulged bases

9PS0|1|AA|C|1011

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PS0|1|AA|U|974
9PS0|1|AA|A|975
9PS0|1|AA|A|976
9PS0|1|AA|A|977
9PS0|1|AA|A|978
9PS0|1|AA|C|979
9PS0|1|AA|U|980
*
9PS0|1|AA|A|1008
9PS0|1|AA|C|1009
9PS0|1|AA|A|1010
9PS0|1|AA|C|1011
9PS0|1|AA|A|1012
9PS0|1|AA|A|1013
9PS0|1|AA|A|1014

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AE

28S ribosomal protein S6, mitochondrial

Chain AI

28S ribosomal protein S11, mitochondrial

Chain AP

28S ribosomal protein S18c, mitochondrial

Chain AQ

Small ribosomal subunit protein bS21m