3D structure

PDB id
9PS7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ structure of the human mitoribosome in the A/T-P-E state from TACO1-knockout cells
Experimental method
ELECTRON MICROSCOPY
Resolution
3.08 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
9PS7|1|A|C|2393, 9PS7|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PS7|1|A|A|2384
9PS7|1|A|U|2385
9PS7|1|A|C|2386
9PS7|1|A|U|2387
9PS7|1|A|A|2388
9PS7|1|A|C|2389
9PS7|1|A|A|2390
9PS7|1|A|A|2391
9PS7|1|A|U|2392
9PS7|1|A|C|2393
9PS7|1|A|A|2394
9PS7|1|A|A|2395
9PS7|1|A|C|2396
9PS7|1|A|C|2397
9PS7|1|A|A|2398
9PS7|1|A|A|2399
9PS7|1|A|C|2400
*
9PS7|1|A|G|2403
9PS7|1|A|U|2404
9PS7|1|A|C|2405
9PS7|1|A|A|2406
9PS7|1|A|U|2407
9PS7|1|A|U|2408

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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