IL_9PS7_035

3D structure

PDB id

9PS7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/T-P-E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CAUAAUCACUUG*CCUG

Length

16 nucleotides

Bulged bases

9PS7|1|A|A|2601, 9PS7|1|A|U|2607, 9PS7|1|A|U|2626

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PS7|1|A|C|2597
9PS7|1|A|A|2598
9PS7|1|A|U|2599
9PS7|1|A|A|2600
9PS7|1|A|A|2601
9PS7|1|A|U|2602
9PS7|1|A|C|2603
9PS7|1|A|A|2604
9PS7|1|A|C|2605
9PS7|1|A|U|2606
9PS7|1|A|U|2607
9PS7|1|A|G|2608
*
9PS7|1|A|C|2624
9PS7|1|A|C|2625
9PS7|1|A|U|2626
9PS7|1|A|G|2627

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain A3

Aurora kinase A-interacting protein

Chain AA

Small subunit ribosomal RNA; SSU rRNA