IL_9PS7_099

3D structure

PDB id

9PS7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/T-P-E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.08 Å

Loop

Sequence

CGAUAG*UCGAAG

Length

12 nucleotides

Bulged bases

9PS7|1|AA|U|1391

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PS7|1|AA|C|1388
9PS7|1|AA|G|1389
9PS7|1|AA|A|1390
9PS7|1|AA|U|1391
9PS7|1|AA|A|1392
9PS7|1|AA|G|1393
*
9PS7|1|AA|U|1413
9PS7|1|AA|C|1414
9PS7|1|AA|G|1415
9PS7|1|AA|A|1416
9PS7|1|AA|A|1417
9PS7|1|AA|G|1418

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain 8

39S ribosomal protein L40, mitochondrial

Chain AX

28S ribosomal protein S29, mitochondrial

Chain f

39S ribosomal protein L48, mitochondrial

Chain m

39S ribosomal protein L55, mitochondrial