IL_9PSI_050
3D structure
- PDB id
- 9PSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.12 Å
Loop
- Sequence
- UCU*AACA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PSI_050 not in the Motif Atlas
- Geometric match to IL_4V9F_053
- Geometric discrepancy: 0.3563
- The information below is about IL_4V9F_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49140.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
9PSI|1|A|U|2953
9PSI|1|A|C|2954
9PSI|1|A|U|2955
*
9PSI|1|A|A|2968
9PSI|1|A|A|2969
9PSI|1|A|C|2970
9PSI|1|A|A|2971
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain Aw
- A/A-tRNA
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain l
- 39S ribosomal protein L54, mitochondrial
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