IL_9PSI_075
3D structure
- PDB id
- 9PSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.12 Å
Loop
- Sequence
- UGGUCAAUUU*AUUA
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PSI|1|AA|U|876
9PSI|1|AA|G|877
9PSI|1|AA|G|878
9PSI|1|AA|U|879
9PSI|1|AA|C|880
9PSI|1|AA|A|881
9PSI|1|AA|A|882
9PSI|1|AA|U|883
9PSI|1|AA|U|884
9PSI|1|AA|U|885
*
9PSI|1|AA|A|910
9PSI|1|AA|U|911
9PSI|1|AA|U|912
9PSI|1|AA|A|913
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AO
- 28S ribosomal protein S18b, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
- Chain Az
- mRNA
Coloring options: