IL_9PSI_079
3D structure
- PDB id
- 9PSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.12 Å
Loop
- Sequence
- AUCACCCCCUCCCCAAU*AACAUAU
- Length
- 24 nucleotides
- Bulged bases
- 9PSI|1|AA|C|954, 9PSI|1|AA|C|959, 9PSI|1|AA|C|962, 9PSI|1|AA|A|966
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PSI|1|AA|A|952
9PSI|1|AA|U|953
9PSI|1|AA|C|954
9PSI|1|AA|A|955
9PSI|1|AA|C|956
9PSI|1|AA|C|957
9PSI|1|AA|C|958
9PSI|1|AA|C|959
9PSI|1|AA|C|960
9PSI|1|AA|U|961
9PSI|1|AA|C|962
9PSI|1|AA|C|963
9PSI|1|AA|C|964
9PSI|1|AA|C|965
9PSI|1|AA|A|966
9PSI|1|AA|A|967
9PSI|1|AA|U|968
*
9PSI|1|AA|A|1036
9PSI|1|AA|A|1037
9PSI|1|AA|C|1038
9PSI|1|AA|A|1039
9PSI|1|AA|U|1040
9PSI|1|AA|A|1041
9PSI|1|AA|U|1042
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain A2
- Small ribosomal subunit protein mS37
- Chain AE
- 28S ribosomal protein S6, mitochondrial
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
- Chain AP
- 28S ribosomal protein S18c, mitochondrial
- Chain AQ
- Small ribosomal subunit protein bS21m
- Chain AT
- 28S ribosomal protein S25, mitochondrial
- Chain AU
- 28S ribosomal protein S26, mitochondrial
Coloring options: