IL_9PSI_109

3D structure

PDB id

9PSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

GACAUU*AACCC

Length

11 nucleotides

Bulged bases

9PSI|1|AA|C|1532

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PSI|1|AA|G|1516
9PSI|1|AA|A|1517
9PSI|1|AA|C|1518
9PSI|1|AA|A|1519
9PSI|1|AA|U|1520
9PSI|1|AA|U|1521
*
9PSI|1|AA|A|1529
9PSI|1|AA|A|1530
9PSI|1|AA|C|1531
9PSI|1|AA|C|1532
9PSI|1|AA|C|1533

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

Small ribosomal subunit protein mS34

Chain AL

28S ribosomal protein S15, mitochondrial

Chain AV

28S ribosomal protein S27, mitochondrial