IL_9PSM_006

3D structure

PDB id

9PSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/P-P/E state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CAAG*CAAAG

Length

9 nucleotides

Bulged bases

9PSM|1|A|A|1892

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PSM|1|A|C|1880
9PSM|1|A|A|1881
9PSM|1|A|A|1882
9PSM|1|A|G|1883
*
9PSM|1|A|C|1890
9PSM|1|A|A|1891
9PSM|1|A|A|1892
9PSM|1|A|A|1893
9PSM|1|A|G|1894

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 3

39S ribosomal protein L35, mitochondrial

Chain 6

39S ribosomal protein L38, mitochondrial

Chain F

39S ribosomal protein L4, mitochondrial

Chain M

39S ribosomal protein L15, mitochondrial

Chain g

39S ribosomal protein L49, mitochondrial