IL_9PSM_067
3D structure
- PDB id
- 9PSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A/P-P/E state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- UAAA*UCA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PSM_067 not in the Motif Atlas
- Geometric match to IL_9DFE_030
- Geometric discrepancy: 0.1738
- The information below is about IL_9DFE_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82096.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
9PSM|1|AA|U|729
9PSM|1|AA|A|730
9PSM|1|AA|A|731
9PSM|1|AA|A|732
*
9PSM|1|AA|U|742
9PSM|1|AA|C|743
9PSM|1|AA|A|744
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AM
- 28S ribosomal protein S16, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
- Chain AU
- 28S ribosomal protein S26, mitochondrial
Coloring options: