IL_9PSM_100

3D structure

PDB id

9PSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/P-P/E state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

CGAUAG*UCGAAG

Length

12 nucleotides

Bulged bases

9PSM|1|AA|U|1391

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PSM|1|AA|C|1388
9PSM|1|AA|G|1389
9PSM|1|AA|A|1390
9PSM|1|AA|U|1391
9PSM|1|AA|A|1392
9PSM|1|AA|G|1393
*
9PSM|1|AA|U|1413
9PSM|1|AA|C|1414
9PSM|1|AA|G|1415
9PSM|1|AA|A|1416
9PSM|1|AA|A|1417
9PSM|1|AA|G|1418

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain AX

28S ribosomal protein S29, mitochondrial

Chain f

39S ribosomal protein L48, mitochondrial