IL_9PSM_111

3D structure

PDB id

9PSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A/P-P/E state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.98 Å

Loop

Sequence

UCUGA*UCAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PSM|1|Ax|U|27
9PSM|1|Ax|C|28
9PSM|1|Ax|U|29
9PSM|1|Ax|G|30
9PSM|1|Ax|A|31
*
9PSM|1|Ax|U|39
9PSM|1|Ax|C|40
9PSM|1|Ax|A|41
9PSM|1|Ax|G|42

Current chains

Chain Ax

P/E-tRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain AG

28S ribosomal protein S9, mitochondrial