IL_9PZG_033

3D structure

PDB id

9PZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

UAGAG*UGGA

Length

9 nucleotides

Bulged bases

9PZG|1|A|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9PZG_033 not in the Motif Atlas

Geometric match to IL_8B0X_032

Geometric discrepancy: 0.0402

The information below is about IL_8B0X_032

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

9PZG|1|A|U|662
9PZG|1|A|A|663
9PZG|1|A|G|664
9PZG|1|A|A|665
9PZG|1|A|G|666
*
9PZG|1|A|U|740
9PZG|1|A|G|741
9PZG|1|A|G|742
9PZG|1|A|A|743

Current chains

Chain A

16S rRNA

Nearby chains

Chain F

Small ribosomal subunit protein bS6, fully modified isoform

Chain O

Small ribosomal subunit protein uS15

Chain R

Small ribosomal subunit protein bS18