IL_9PZG_034
3D structure
- PDB id
- 9PZG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- AGAAU*GGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9PZG_034 not in the Motif Atlas
- Geometric match to IL_8B0X_176
- Geometric discrepancy: 0.0715
- The information below is about IL_8B0X_176
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.2
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
9PZG|1|A|A|673
9PZG|1|A|G|674
9PZG|1|A|A|675
9PZG|1|A|A|676
9PZG|1|A|U|677
*
9PZG|1|A|G|713
9PZG|1|A|G|714
9PZG|1|A|A|715
9PZG|1|A|A|716
9PZG|1|A|U|717
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain F
- Small ribosomal subunit protein bS6, fully modified isoform
- Chain K
- Small ribosomal subunit protein uS11
- Chain R
- Small ribosomal subunit protein bS18
- Chain U
- Small ribosomal subunit protein bS21
Coloring options: