IL_9Q1Q_017
3D structure
- PDB id
- 9Q1Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NediV IRES (A site) in complex with Rabbit 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CGCUCC*GCCCG
- Length
- 11 nucleotides
- Bulged bases
- 9Q1Q|1|5|U|171, 9Q1Q|1|5|C|265
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q1Q|1|5|C|168
9Q1Q|1|5|G|169
9Q1Q|1|5|C|170
9Q1Q|1|5|U|171
9Q1Q|1|5|C|172
9Q1Q|1|5|C|173
*
9Q1Q|1|5|G|263
9Q1Q|1|5|C|264
9Q1Q|1|5|C|265
9Q1Q|1|5|C|266
9Q1Q|1|5|G|267
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain L
- Large ribosomal subunit protein eL13
- Chain h
- 60S ribosomal protein L35
Coloring options: