IL_9Q1S_025
3D structure
- PDB id
- 9Q1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NediV IRES (P site) in complex with Rabbit 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AUUCAAC*GCGCAUUU
- Length
- 15 nucleotides
- Bulged bases
- 9Q1S|1|5|U|687
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q1S|1|5|A|466
9Q1S|1|5|U|467
9Q1S|1|5|U|468
9Q1S|1|5|C|469
9Q1S|1|5|A|470
9Q1S|1|5|A|471
9Q1S|1|5|C|472
*
9Q1S|1|5|G|682
9Q1S|1|5|C|683
9Q1S|1|5|G|684
9Q1S|1|5|C|685
9Q1S|1|5|A|686
9Q1S|1|5|U|687
9Q1S|1|5|U|688
9Q1S|1|5|U|689
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- Large ribosomal subunit protein eL6
- Chain r
- 60S ribosomal protein L28
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