IL_9Q1S_153
3D structure
- PDB id
- 9Q1S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NediV IRES (P site) in complex with Rabbit 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGAAACG*CUCGCC
- Length
- 13 nucleotides
- Bulged bases
- 9Q1S|1|5|C|4895, 9Q1S|1|5|C|4926, 9Q1S|1|5|G|4927, 9Q1S|1|5|C|4928
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q1S|1|5|G|4890
9Q1S|1|5|G|4891
9Q1S|1|5|A|4892
9Q1S|1|5|A|4893
9Q1S|1|5|A|4894
9Q1S|1|5|C|4895
9Q1S|1|5|G|4896
*
9Q1S|1|5|C|4924
9Q1S|1|5|U|4925
9Q1S|1|5|C|4926
9Q1S|1|5|G|4927
9Q1S|1|5|C|4928
9Q1S|1|5|C|4929
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain E
- Large ribosomal subunit protein eL6
- Chain M
- 60S ribosomal protein L14
- Chain O
- Large ribosomal subunit protein uL13
Coloring options: