IL_9Q2M_213

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|G|660
9Q2M|1|9|A|661
9Q2M|1|9|A|662
9Q2M|1|9|A|663
9Q2M|1|9|A|664
9Q2M|1|9|A|665
9Q2M|1|9|A|666
9Q2M|1|9|U|667
9Q2M|1|9|U|668
*
9Q2M|1|9|A|696
9Q2M|1|9|C|697
9Q2M|1|9|C|698
9Q2M|1|9|G|699
9Q2M|1|9|C|700
9Q2M|1|9|A|701
9Q2M|1|9|G|702
9Q2M|1|9|C|703

Current chains

Chain 9

18S rRNA

Nearby chains

Chain EE

40S ribosomal protein S4

Chain JJ

40S ribosomal protein S9

Chain LL

Small ribosomal subunit protein uS17

Chain WW

40S ribosomal protein S15a