IL_9Q2M_238
3D structure
- PDB id
- 9Q2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q2M_238 not in the Motif Atlas
- Geometric match to IL_8GLP_284
- Geometric discrepancy: 0.1327
- The information below is about IL_8GLP_284
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.5
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 29
Unit IDs
9Q2M|1|9|C|1101
9Q2M|1|9|G|1102
9Q2M|1|9|G|1103
9Q2M|1|9|A|1104
9Q2M|1|9|U|1105
*
9Q2M|1|9|A|1138
9Q2M|1|9|G|1139
9Q2M|1|9|A|1140
9Q2M|1|9|A|1141
9Q2M|1|9|G|1142
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain GG
- 40S ribosomal protein S6
- Chain II
- 40S ribosomal protein S8
- Chain W
- uL24
Coloring options: