IL_9Q2M_261

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|G|1610
9Q2M|1|9|G|1611
9Q2M|1|9|G|1612
9Q2M|1|9|A|1613
9Q2M|1|9|U|1614
9Q2M|1|9|C|1615
9Q2M|1|9|G|1616
*
9Q2M|1|9|C|1635
9Q2M|1|9|A|1636
9Q2M|1|9|U|1637
9Q2M|1|9|G|1638
9Q2M|1|9|A|1639
9Q2M|1|9|A|1640
9Q2M|1|9|C|1641

Current chains

Chain 9

18S rRNA

Nearby chains

Chain SS

40S ribosomal protein S18

Chain TT

Small ribosomal subunit protein eS19