IL_9Q2O_207
3D structure
- PDB id
- 9Q2O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- NediV IRES in complex with Rabbit 80S ribosome with A site Ala-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- AGGGCAAGUC*GCU
- Length
- 13 nucleotides
- Bulged bases
- 9Q2O|1|9|U|607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2O|1|9|A|599
9Q2O|1|9|G|600
9Q2O|1|9|G|601
9Q2O|1|9|G|602
9Q2O|1|9|C|603
9Q2O|1|9|A|604
9Q2O|1|9|A|605
9Q2O|1|9|G|606
9Q2O|1|9|U|607
9Q2O|1|9|C|608
*
9Q2O|1|9|G|635
9Q2O|1|9|C|636
9Q2O|1|9|U|637
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain 1
- NediV IRES
- Chain CC
- 40S ribosomal protein S2
- Chain DD
- 40S ribosomal protein S3
- Chain JJ
- 40S ribosomal protein S9
- Chain ee
- Small ribosomal subunit protein eS30
Coloring options: