IL_9Q2P_121

3D structure

PDB id

9Q2P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCAAAUGCCUCG*CGCG

Length

16 nucleotides

Bulged bases

9Q2P|1|5|A|3785, 9Q2P|1|5|C|3791, 9Q2P|1|5|C|3810

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2P|1|5|C|3781
9Q2P|1|5|C|3782
9Q2P|1|5|A|3783
9Q2P|1|5|A|3784
9Q2P|1|5|A|3785
9Q2P|1|5|U|3786
9Q2P|1|5|G|3787
9Q2P|1|5|C|3788
9Q2P|1|5|C|3789
9Q2P|1|5|U|3790
9Q2P|1|5|C|3791
9Q2P|1|5|G|3792
*
9Q2P|1|5|C|3808
9Q2P|1|5|G|3809
9Q2P|1|5|C|3810
9Q2P|1|5|G|3811

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 9

Small subunit ribosomal RNA; SSU rRNA

Chain n

eL41