IL_9Q2P_126
3D structure
- PDB id
- 9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 9Q2P|1|5|G|4183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q2P_126 not in the Motif Atlas
- Homologous match to IL_8GLP_133
- Geometric discrepancy: 0.0897
- The information below is about IL_8GLP_133
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87316.4
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
9Q2P|1|5|U|3927
9Q2P|1|5|A|3928
9Q2P|1|5|G|3929
*
9Q2P|1|5|U|4181
9Q2P|1|5|G|4182
9Q2P|1|5|G|4183
9Q2P|1|5|G|4184
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain A
- 60S ribosomal protein L8
- Chain N
- 60S ribosomal protein L15
- Chain o
- eL42
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