IL_9Q2P_186

3D structure

PDB id

9Q2P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GACUU*AUGCCGAC

Length

13 nucleotides

Bulged bases

9Q2P|1|9|C|142, 9Q2P|1|9|U|143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2P|1|9|G|130
9Q2P|1|9|A|141
9Q2P|1|9|C|142
9Q2P|1|9|U|143
9Q2P|1|9|U|144
*
9Q2P|1|9|A|175
9Q2P|1|9|U|176
9Q2P|1|9|G|177
9Q2P|1|9|C|178
9Q2P|1|9|C|179
9Q2P|1|9|G|180
9Q2P|1|9|A|181
9Q2P|1|9|C|182

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain GG

40S ribosomal protein S6