3D structure

PDB id
9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAAAAAAUU*ACCGCAGC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Q2P|1|9|G|807
9Q2P|1|9|A|808
9Q2P|1|9|A|809
9Q2P|1|9|A|810
9Q2P|1|9|A|811
9Q2P|1|9|A|812
9Q2P|1|9|A|813
9Q2P|1|9|U|814
9Q2P|1|9|U|815
*
9Q2P|1|9|A|849
9Q2P|1|9|C|850
9Q2P|1|9|C|851
9Q2P|1|9|G|852
9Q2P|1|9|C|853
9Q2P|1|9|A|854
9Q2P|1|9|G|855
9Q2P|1|9|C|856

Current chains

Chain 9
18S ribosomal RNA

Nearby chains

Chain EE
40S ribosomal protein S4
Chain JJ
40S ribosomal protein S9
Chain LL
Small ribosomal subunit protein uS17
Chain WW
40S ribosomal protein S15a

Coloring options:

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