IL_9Q2P_253

3D structure

PDB id

9Q2P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

9Q2P|1|9|A|1580, 9Q2P|1|9|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2P|1|9|G|1550
9Q2P|1|9|U|1551
9Q2P|1|9|G|1552
9Q2P|1|9|C|1553
9Q2P|1|9|C|1554
9Q2P|1|9|U|1555
9Q2P|1|9|A|1556
9Q2P|1|9|C|1557
9Q2P|1|9|C|1558
*
9Q2P|1|9|G|1577
9Q2P|1|9|U|1578
9Q2P|1|9|A|1579
9Q2P|1|9|A|1580
9Q2P|1|9|C|1581
9Q2P|1|9|C|1582

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain DD

40S ribosomal protein S3

Chain KK

40S ribosomal protein S10

Chain UU

40S ribosomal protein S20

Chain dd

40S ribosomal protein S29