IL_9Q2T_002

3D structure

PDB id

9Q2T (explore in PDB, NAKB, or RNA 3D Hub)

Description

NediV IRES in complex with Rabbit 80S ribosome with eEF2 and P site Ala-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

UAUACGG*UGACAGG

Length

14 nucleotides

Bulged bases

9Q2T|1|1|C|1343

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2T|1|1|U|1339
9Q2T|1|1|A|1340
9Q2T|1|1|U|1341
9Q2T|1|1|A|1342
9Q2T|1|1|C|1343
9Q2T|1|1|G|1344
9Q2T|1|1|G|1345
*
9Q2T|1|1|U|1386
9Q2T|1|1|G|1387
9Q2T|1|1|A|1388
9Q2T|1|1|C|1389
9Q2T|1|1|A|1390
9Q2T|1|1|G|1391
9Q2T|1|1|G|1392

Current chains

Chain 1

NediV IRES

Nearby chains