IL_9Q3Q_001
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q3Q_001 not in the Motif Atlas
- Homologous match to IL_8B0X_065
- Geometric discrepancy: 0.0304
- The information below is about IL_8B0X_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22311.3
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 11
Unit IDs
9Q3Q|1|A|G|24
9Q3Q|1|A|U|25
9Q3Q|1|A|G|26
9Q3Q|1|A|G|27
9Q3Q|1|A|A|28
9Q3Q|1|A|U|29
9Q3Q|1|A|G|30
*
9Q3Q|1|A|C|510
9Q3Q|1|A|U|511
9Q3Q|1|A|G|512
9Q3Q|1|A|A|513
9Q3Q|1|A|A|514
9Q3Q|1|A|A|515
9Q3Q|1|A|C|516
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain S
- 50S ribosomal protein L20
- Chain U
- Large ribosomal subunit protein uL22
Coloring options: