IL_9Q3Q_114
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- CC*GAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q3Q_114 not in the Motif Atlas
- Homologous match to IL_8QYX_167
- Geometric discrepancy: 0.0549
- The information below is about IL_8QYX_167
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73108.4
- Basepair signature
- cWW-cWS-cSH-cWW
- Number of instances in this motif group
- 25
Unit IDs
9Q3Q|1|B|C|30
9Q3Q|1|B|C|31
*
9Q3Q|1|B|G|51
9Q3Q|1|B|A|52
9Q3Q|1|B|A|53
9Q3Q|1|B|G|54
Current chains
- Chain B
- 5S Ribosomal RNA
Nearby chains
- Chain F
- Large ribosomal subunit protein uL5
- Chain Q
- Large ribosomal subunit protein uL18
Coloring options: