IL_9Q3Q_149
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- UAGAG*UGGA
- Length
- 9 nucleotides
- Bulged bases
- 9Q3Q|1|a|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q3Q_149 not in the Motif Atlas
- Homologous match to IL_8B0X_032
- Geometric discrepancy: 0.0368
- The information below is about IL_8B0X_032
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
9Q3Q|1|a|U|662
9Q3Q|1|a|A|663
9Q3Q|1|a|G|664
9Q3Q|1|a|A|665
9Q3Q|1|a|G|666
*
9Q3Q|1|a|U|740
9Q3Q|1|a|G|741
9Q3Q|1|a|G|742
9Q3Q|1|a|A|743
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
- Chain o
- Small ribosomal subunit protein uS15
- Chain r
- Small ribosomal subunit protein bS18
Coloring options: