IL_9Q3Q_171
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- CGACC*GCAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q3Q_171 not in the Motif Atlas
- Homologous match to IL_8B0X_055
- Geometric discrepancy: 0.0865
- The information below is about IL_8B0X_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9Q3Q|1|a|C|1259
9Q3Q|1|a|G|1260
9Q3Q|1|a|A|1261
9Q3Q|1|a|C|1262
9Q3Q|1|a|C|1263
*
9Q3Q|1|a|G|1272
9Q3Q|1|a|C|1273
9Q3Q|1|a|A|1274
9Q3Q|1|a|A|1275
9Q3Q|1|a|G|1276
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain n
- Small ribosomal subunit protein uS14
- Chain s
- Small ribosomal subunit protein uS19
Coloring options: