IL_9Q6Q_147
3D structure
- PDB id
- 9Q6Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-18 triazole derivative and protein Y at 2.90A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q6Q_147 not in the Motif Atlas
- Homologous match to IL_8B0X_036
- Geometric discrepancy: 0.0626
- The information below is about IL_8B0X_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.4
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 21
Unit IDs
9Q6Q|1|1a|C|779
9Q6Q|1|1a|A|780
9Q6Q|1|1a|A|781
9Q6Q|1|1a|A|782
9Q6Q|1|1a|C|783
*
9Q6Q|1|1a|G|799
9Q6Q|1|1a|G|800
9Q6Q|1|1a|U|801
9Q6Q|1|1a|A|802
9Q6Q|1|1a|G|803
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 1k
- 30S ribosomal protein S11
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