IL_9Q6S_205

3D structure

PDB id

9Q6S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-30 triazole derivative and protein Y at 2.90A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GCU*AAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9Q6S_205 not in the Motif Atlas

Geometric match to IL_9DFE_030

Geometric discrepancy: 0.1263

The information below is about IL_9DFE_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54325.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

9Q6S|1|2A|G|875
9Q6S|1|2A|C|876
9Q6S|1|2A|U|877
*
9Q6S|1|2A|A|899
9Q6S|1|2A|A|900
9Q6S|1|2A|A|901
9Q6S|1|2A|C|902

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25