IL_9Q6S_216

3D structure

PDB id

9Q6S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-30 triazole derivative and protein Y at 2.90A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGAAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

9Q6S|1|2A|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q6S|1|2A|C|1043
9Q6S|1|2A|G|1044
9Q6S|1|2A|A|1045
9Q6S|1|2A|A|1046
9Q6S|1|2A|G|1047
9Q6S|1|2A|A|1048
9Q6S|1|2A|C|1049
9Q6S|1|2A|A|1050
9Q6S|1|2A|G|1051
9Q6S|1|2A|C|1052
9Q6S|1|2A|C|1053
*
9Q6S|1|2A|G|1106
9Q6S|1|2A|G|1107
9Q6S|1|2A|U|1108
9Q6S|1|2A|C|1109
9Q6S|1|2A|G|1110
9Q6S|1|2A|A|1111
9Q6S|1|2A|G|1112

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2H

50S ribosomal protein L6