IL_9Q6T_224

3D structure

PDB id

9Q6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin and protein Y at 2.65A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.65 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

9Q6T|1|2A|A|1379

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9Q6T_224 not in the Motif Atlas

Homologous match to IL_8B0X_111

Geometric discrepancy: 0.5194

The information below is about IL_8B0X_111

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_89021.4

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

8

Unit IDs

9Q6T|1|2A|C|1351
9Q6T|1|2A|U|1352
9Q6T|1|2A|A|1353
9Q6T|1|2A|A|1354
9Q6T|1|2A|G|1355
*
9Q6T|1|2A|C|1376
9Q6T|1|2A|G|1377
9Q6T|1|2A|A|1378
9Q6T|1|2A|A|1379
9Q6T|1|2A|G|1380

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34

Chain 2D

50S ribosomal protein L2