IL_9Q7Q_023
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GGAG*CACC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q7Q_023 not in the Motif Atlas
- Geometric match to IL_9H3G_206
- Geometric discrepancy: 0.2794
- The information below is about IL_9H3G_206
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.5
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 42
Unit IDs
9Q7Q|1|5|G|461
9Q7Q|1|5|G|462
9Q7Q|1|5|A|463
9Q7Q|1|5|G|464
*
9Q7Q|1|5|C|691
9Q7Q|1|5|A|692
9Q7Q|1|5|C|693
9Q7Q|1|5|C|694
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L6
- Chain r
- eL28
Coloring options: