IL_9Q7Q_025
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GG*CGACC
- Length
- 7 nucleotides
- Bulged bases
- 9Q7Q|1|5|G|666, 9Q7Q|1|5|A|667, 9Q7Q|1|5|C|668
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q7Q_025 not in the Motif Atlas
- Geometric match to IL_7Q80_001
- Geometric discrepancy: 0.1713
- The information below is about IL_7Q80_001
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_09092.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
9Q7Q|1|5|G|487
9Q7Q|1|5|G|488
*
9Q7Q|1|5|C|665
9Q7Q|1|5|G|666
9Q7Q|1|5|A|667
9Q7Q|1|5|C|668
9Q7Q|1|5|C|669
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain Q
- Large ribosomal subunit protein eL18
- Chain r
- eL28
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