IL_9Q7Q_031

3D structure

PDB id

9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

ABCE1-eRF1-RNC-AMD1C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CUGGG*CG

Length

7 nucleotides

Bulged bases

9Q7Q|1|5|G|729, 9Q7Q|1|5|G|730

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9Q7Q_031 not in the Motif Atlas

Geometric match to IL_8GLP_036

Geometric discrepancy: 0.097

The information below is about IL_8GLP_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75501.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

3

Unit IDs

9Q7Q|1|5|C|727
9Q7Q|1|5|U|728
9Q7Q|1|5|G|729
9Q7Q|1|5|G|730
9Q7Q|1|5|G|731
*
9Q7Q|1|5|C|938
9Q7Q|1|5|G|939

Current chains

Chain 5

28S rRNA

Nearby chains

Chain F

Large ribosomal subunit protein uL30

Chain M

Large ribosomal subunit protein eL14

Chain S

Large ribosomal subunit protein eL20