3D structure

PDB id
9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
ABCE1-eRF1-RNC-AMD1C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.86 Å

Loop

Sequence
CUGAG*CGAAAG
Length
11 nucleotides
Bulged bases
9Q7Q|1|5|A|2512, 9Q7Q|1|5|A|2513
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Q7Q|1|5|C|2446
9Q7Q|1|5|U|2447
9Q7Q|1|5|G|2448
9Q7Q|1|5|A|2449
9Q7Q|1|5|G|2450
*
9Q7Q|1|5|C|2509
9Q7Q|1|5|G|2510
9Q7Q|1|5|A|2511
9Q7Q|1|5|A|2512
9Q7Q|1|5|A|2513
9Q7Q|1|5|G|2514

Current chains

Chain 5
28S rRNA

Nearby chains

Chain 8
5.8S ribosomal RNA; 5.8S rRNA
Chain A
Ribosomal protein L8
Chain g
60S ribosomal protein L34
Chain j
Ribosomal protein L37
Chain l
eL39

Coloring options:

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