3D structure

PDB id
9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
ABCE1-eRF1-RNC-AMD1C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.86 Å

Loop

Sequence
CCAAAUGCCUCG*CGCG
Length
16 nucleotides
Bulged bases
9Q7Q|1|5|A|3785, 9Q7Q|1|5|C|3791, 9Q7Q|1|5|C|3810
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Q7Q|1|5|C|3781
9Q7Q|1|5|C|3782
9Q7Q|1|5|A|3783
9Q7Q|1|5|A|3784
9Q7Q|1|5|A|3785
9Q7Q|1|5|U|3786
9Q7Q|1|5|G|3787
9Q7Q|1|5|C|3788
9Q7Q|1|5|C|3789
9Q7Q|1|5|U|3790
9Q7Q|1|5|C|3791
9Q7Q|1|5|G|3792
*
9Q7Q|1|5|C|3808
9Q7Q|1|5|G|3809
9Q7Q|1|5|C|3810
9Q7Q|1|5|G|3811

Current chains

Chain 5
28S rRNA

Nearby chains

Chain I
60S ribosomal protein L10
Chain K
Small subunit ribosomal RNA; SSU rRNA
Chain RF
Eukaryotic peptide chain release factor subunit 1
Chain n
eL41

Coloring options:

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