IL_9Q7Q_132
3D structure
- PDB id
- 9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ABCE1-eRF1-RNC-AMD1C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 9Q7Q|1|5|A|4548
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q7Q_132 not in the Motif Atlas
- Homologous match to IL_8GLP_154
- Geometric discrepancy: 0.1237
- The information below is about IL_8GLP_154
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.5
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 188
Unit IDs
9Q7Q|1|5|C|4537
9Q7Q|1|5|G|4538
*
9Q7Q|1|5|C|4547
9Q7Q|1|5|A|4548
9Q7Q|1|5|G|4549
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 1
- AMD1 C-tail
- Chain 2
- Transfer RNA; tRNA
- Chain A
- Ribosomal protein L8
- Chain I
- 60S ribosomal protein L10
- Chain RF
- Eukaryotic peptide chain release factor subunit 1
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