3D structure

PDB id
9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
ABCE1-eRF1-RNC-AMD1C
Experimental method
ELECTRON MICROSCOPY
Resolution
2.86 Å

Loop

Sequence
GGAAAUG*CUCGCC
Length
13 nucleotides
Bulged bases
9Q7Q|1|5|U|4895, 9Q7Q|1|5|U|4925, 9Q7Q|1|5|C|4928
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Q7Q|1|5|G|4890
9Q7Q|1|5|G|4891
9Q7Q|1|5|A|4892
9Q7Q|1|5|A|4893
9Q7Q|1|5|A|4894
9Q7Q|1|5|U|4895
9Q7Q|1|5|G|4896
*
9Q7Q|1|5|C|4924
9Q7Q|1|5|U|4925
9Q7Q|1|5|C|4926
9Q7Q|1|5|G|4927
9Q7Q|1|5|C|4928
9Q7Q|1|5|C|4929

Current chains

Chain 5
28S rRNA

Nearby chains

Chain E
60S ribosomal protein L6
Chain M
Large ribosomal subunit protein eL14
Chain O
Large ribosomal subunit protein uL13

Coloring options:

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