IL_9Q7Q_181

3D structure

PDB id

9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

ABCE1-eRF1-RNC-AMD1C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

UUA*UA

Length

5 nucleotides

Bulged bases

9Q7Q|1|K|U|488

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9Q7Q_181 not in the Motif Atlas

Homologous match to IL_9PN5_164

Geometric discrepancy: 0.0851

The information below is about IL_9PN5_164

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.8

Basepair signature

cWW-L-cWW

Number of instances in this motif group

192

Unit IDs

9Q7Q|1|K|U|487
9Q7Q|1|K|U|488
9Q7Q|1|K|A|489
*
9Q7Q|1|K|U|511
9Q7Q|1|K|A|512

Current chains

Chain K

18S rRNA

Nearby chains

Chain AB

ATP binding cassette subfamily E member 1

Chain NN

Small ribosomal subunit protein eS24

Chain x

Small ribosomal subunit protein eS4