IL_9Q87_069
3D structure
- PDB id
- 9Q87 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.55 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 9Q87|1|a|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9Q87_069 not in the Motif Atlas
- Homologous match to IL_5J7L_248
- Geometric discrepancy: 0.0565
- The information below is about IL_5J7L_248
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37015.1
- Basepair signature
- cWW-tSS-tSS-tHH-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
9Q87|1|a|G|81
9Q87|1|a|U|82
9Q87|1|a|A|83
9Q87|1|a|A|84
9Q87|1|a|G|85
*
9Q87|1|a|C|97
9Q87|1|a|G|98
9Q87|1|a|U|99
9Q87|1|a|U|100
9Q87|1|a|A|101
9Q87|1|a|U|102
9Q87|1|a|A|103
9Q87|1|a|A|104
9Q87|1|a|C|105
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain t
- Large ribosomal subunit protein uL24
- Chain x
- Large ribosomal subunit protein uL29
Coloring options: