IL_9Q87_150

3D structure

PDB id

9Q87 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

GAGCCUUGAUG*CUUUAAUGUUU

Length

22 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q87|1|a|G|2104
9Q87|1|a|A|2105
9Q87|1|a|G|2106
9Q87|1|a|C|2107
9Q87|1|a|C|2108
9Q87|1|a|U|2109
9Q87|1|a|U|2110
9Q87|1|a|G|2111
9Q87|1|a|A|2112
9Q87|1|a|U|2113
9Q87|1|a|G|2114
*
9Q87|1|a|C|2183
9Q87|1|a|U|2184
9Q87|1|a|U|2185
9Q87|1|a|U|2186
9Q87|1|a|A|2187
9Q87|1|a|A|2188
9Q87|1|a|U|2189
9Q87|1|a|G|2190
9Q87|1|a|U|2191
9Q87|1|a|U|2192
9Q87|1|a|U|2193

Current chains

Chain a

23S rRNA

Nearby chains

Chain h

Large ribosomal subunit protein bL9