IL_9Q87_151

3D structure

PDB id

9Q87 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

GUGUAGGAUAGGU*ACCC

Length

17 nucleotides

Bulged bases

9Q87|1|a|U|2115, 9Q87|1|a|A|2118, 9Q87|1|a|U|2122, 9Q87|1|a|A|2123

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q87|1|a|G|2114
9Q87|1|a|U|2115
9Q87|1|a|G|2116
9Q87|1|a|U|2117
9Q87|1|a|A|2118
9Q87|1|a|G|2119
9Q87|1|a|G|2120
9Q87|1|a|A|2121
9Q87|1|a|U|2122
9Q87|1|a|A|2123
9Q87|1|a|G|2124
9Q87|1|a|G|2125
9Q87|1|a|U|2126
*
9Q87|1|a|A|2180
9Q87|1|a|C|2181
9Q87|1|a|C|2182
9Q87|1|a|C|2183

Current chains

Chain a

23S rRNA

Nearby chains