IL_9QEH_023
3D structure
- PDB id
- 9QEH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.08 Å
Loop
- Sequence
- GCG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 9QEH|1|A|C|821, 9QEH|1|A|A|833, 9QEH|1|A|A|834, 9QEH|1|A|U|835||A
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9QEH_023 not in the Motif Atlas
- Geometric match to IL_9DFE_021
- Geometric discrepancy: 0.0899
- The information below is about IL_9DFE_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
9QEH|1|A|G|820
9QEH|1|A|C|821
9QEH|1|A|G|822
*
9QEH|1|A|C|832
9QEH|1|A|A|833
9QEH|1|A|A|834
9QEH|1|A|U|835||A
9QEH|1|A|C|836
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34
- Chain C
- Large ribosomal subunit protein uL2
- Chain E
- Large ribosomal subunit protein uL4
- Chain Q
- Large ribosomal subunit protein uL22
Coloring options: