IL_9QEH_049

3D structure

PDB id

9QEH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.08 Å

Loop

Sequence

UAG*CACA

Length

7 nucleotides

Bulged bases

9QEH|1|A|C|1606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9QEH_049 not in the Motif Atlas

Homologous match to IL_9DFE_055

Geometric discrepancy: 0.4762

The information below is about IL_9DFE_055

Detailed Annotation

Isolated tWW basepair

Broad Annotation

Isolated tWW basepair

Motif group

IL_31990.1

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

2

Unit IDs

9QEH|1|A|U|1477
9QEH|1|A|A|1478
9QEH|1|A|G|1479
*
9QEH|1|A|C|1604
9QEH|1|A|A|1605
9QEH|1|A|C|1606
9QEH|1|A|A|1607

Current chains

Chain A

23S rRNA

Nearby chains