IL_9QLO_025

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

GUGUCGGCGGCCCGG*UCCCCCGACC

Length

25 nucleotides

Bulged bases

9QLO|1|L5|C|501, 9QLO|1|L5|C|502, 9QLO|1|L5|C|503, 9QLO|1|L5|G|504

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|L5|G|491
9QLO|1|L5|U|492
9QLO|1|L5|G|493
9QLO|1|L5|U|494
9QLO|1|L5|C|495
9QLO|1|L5|G|496
9QLO|1|L5|G|497
9QLO|1|L5|C|498
9QLO|1|L5|G|499
9QLO|1|L5|G|500
9QLO|1|L5|C|501
9QLO|1|L5|C|502
9QLO|1|L5|C|503
9QLO|1|L5|G|504
9QLO|1|L5|G|505
*
9QLO|1|L5|U|653
9QLO|1|L5|C|654
9QLO|1|L5|C|655
9QLO|1|L5|C|656
9QLO|1|L5|C|657
9QLO|1|L5|C|658
9QLO|1|L5|G|659
9QLO|1|L5|A|660
9QLO|1|L5|C|661
9QLO|1|L5|C|662

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LQ

60S ribosomal protein L18