IL_9QLO_050

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

GAAAG*CUAGUAGC

Length

13 nucleotides

Bulged bases

9QLO|1|L5|A|1650, 9QLO|1|L5|G|1654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|L5|G|1522
9QLO|1|L5|A|1523
9QLO|1|L5|A|1524
9QLO|1|L5|A|1525
9QLO|1|L5|G|1526
*
9QLO|1|L5|C|1648
9QLO|1|L5|U|1649
9QLO|1|L5|A|1650
9QLO|1|L5|G|1651
9QLO|1|L5|U|1652
9QLO|1|L5|A|1653
9QLO|1|L5|G|1654
9QLO|1|L5|C|1655

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain La

60S ribosomal protein L27a

Chain Lj

Large ribosomal subunit protein eL37